Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015863452.1_cds_XP_016515691.1_28014
CDS Infomation

[gene=LOC107832365] [db_xref=GeneID:107832365] [protein=L-ascorbate oxidase homolog] [protein_id=XP_016515691.1] [location=complement(join(38684..38887,39203..39281,39371..39736,40043..40388,40483..40579,40689..40959,41781..41890,41983..42126))] [gbkey=CDS]
Sequence

ATGGGGAAAGTTGCTCTTTTTTATTTGATTTGTGGTATCTTGGTTTTTGGGAGCGTCTCT
GTGGTGAAAGCAGAGGATGCTTACAGATATTTTACATGGACTGCTACTTATGGAACTGCT
TCTCCCCTTGGTGTTCCTCAGCAGATAATCCTGATCAATGGTCAATTTCCTGGTCCAAAA
CTTGATCTTGTCACTAATGAGAATGTAATCCTTAACCTTATTAATAAGTTGGACGAGCCT
CTTCTATTGACATGGAACGGAATCAAACAAAGGAAGAACTCATGGCAAGATGGAGTTTTG
GGAACTAATTGTCCCATTCCTCCAAATTCAAATTACACTTACAAGTTCCAAATGAAAGAC
CAAATTGGAAGCTATACATACTTCCCTTCAACTCAATTGCACAGAGCTGTTGGAGGTTTC
GGAGCACTAAACATATATGCAAGATCAGTAATCCCAGTTCCATATGCTAAACCTGCTGGA
GATTTCAGTTTACTTATTGGTGATTGGTACAAGAGCAGCCATAAGGTATTGCGGCAAATA
TTGGACTCAGGGAAGTCTCTTCCTTTTCCAAGTGGCCTCCTTATAAACGGACAGAAGCAG
TCTACCTTCACTGGCGATCAAGGAAAAACATACATGTTCAGGATCTCTAATGTAGGTTTG
AAAAATACCTTTAACTTCAGAATTCAGGGCCACAAGATGAGAGTCGTCGAGGTTGAAGGA
TCCCATGTGATTCAGAGCCTCTATGATTCTCTTGATGTCCATGTTGGTCAATCTATGTCC
GTCCTTGTTACGTTGGATCAGCCTCCAAAGGACTACTACATTGTCGCTTCCACAAGGTTC
ACAAGGACTGTTCTTACTGCTACTGCAGTTCTCCACTACTCTAACTCTAAGGCGTCTGTT
TCTGGACCCATGCCATCTGCTCCCGCTGGTCAAATGCACTGGTCTATGTTGCAAGCCAGA
ACATTCAGGTGGAATCTGACAGCAAATGCAGCTAGACCAAATCCTCAGGGTACATTCCAC
TATGGTAAAATTACAATATCAAGGACTTTTGTGCTGGCTAACTCTGCACCTCTTATCAAT
GGGAAGCTGAGATATGCTGTGAATCGGGTCTCTTATGTTAATCCTGATACTCCACTAAAA
CTTGCTGATCATTTCAACATCCCCGGAGTCTTCAGCTTGAACTCCATTCAAACTTTTCCC
TCTGATGGTTCTCCTTACCTAGCTACAGCTGTGTTTCCAGCTTCTCACCATGATTTCATC
GAAATCGTTTTCCAAAACAATGAGGCTACTATGCAATCTTGGCATCTTGATGGCTATGAC
TTCTGGGTCGTCGGTTTTGGATCTCGCACATGGACACAAGCAAGTAGAAATAAGTACAAT
CTTGTTGATGCTCCTACTAGACATACTACACAGGTTTATCCAAAATCCTGGACTGCTATA
TTGGTATCATTGGACAACCAAGGAATGTGGAATTTGAGGTCAGCAATGTGGGATAGGCAA
TATCTTGGACAACAGGTGTACCTCAGGGTCTACAACCCAACCCAAAGTCTAGCTAATGAA
TATGACATACCTACTAATGCTCTTCTATGTGGCAAAGCTGTTGGTCGACATCCTTAA

Peptide Sequence

PEP ID

XP_016515691.1
PEP Infomation

PREDICTED: L-ascorbate oxidase homolog [Nicotiana tabacum]
Sequence

MGKVALFYLICGILVFGSVSVVKAEDAYRYFTWTATYGTASPLGVPQQIILINGQFPGPK
LDLVTNENVILNLINKLDEPLLLTWNGIKQRKNSWQDGVLGTNCPIPPNSNYTYKFQMKD
QIGSYTYFPSTQLHRAVGGFGALNIYARSVIPVPYAKPAGDFSLLIGDWYKSSHKVLRQI
LDSGKSLPFPSGLLINGQKQSTFTGDQGKTYMFRISNVGLKNTFNFRIQGHKMRVVEVEG
SHVIQSLYDSLDVHVGQSMSVLVTLDQPPKDYYIVASTRFTRTVLTATAVLHYSNSKASV
SGPMPSAPAGQMHWSMLQARTFRWNLTANAARPNPQGTFHYGKITISRTFVLANSAPLIN
GKLRYAVNRVSYVNPDTPLKLADHFNIPGVFSLNSIQTFPSDGSPYLATAVFPASHHDFI
EIVFQNNEATMQSWHLDGYDFWVVGFGSRTWTQASRNKYNLVDAPTRHTTQVYPKSWTAI
LVSLDNQGMWNLRSAMWDRQYLGQQVYLRVYNPTQSLANEYDIPTNALLCGKAVGRHP

Transcript Sequence

Gene sequence data has not been registered.